Function reference • outerbase

outermod

outermod Rcpp_outermod-class Rcpp_outermod: Outer product-type model

setcovfs: Set covariance functions

setknot: Set knot points

gethyp: Get the hyperparameters

outermod$getvar: Get variance of coefficients

outermod$selectterms: Select optimal terms

outermod$updatehyp: Update hyperparameters

outerbase

outerbase-package _PACKAGE: outerbase

outerbase Rcpp_outerbase-class Rcpp_outerbase: Outer product-type basis

outerbase$build: Builds the outerbase

outerbase$getbase: Get base functions

outerbase$getmat: Get basis matrix

outerbase$matmul: Matrix multiply

outerbase$tmatmul: Transpose Matrix multiply

Statistical models and lpdfs

lpdf Rcpp_lpdf-class Rcpp_lpdf: Log probability density function class

lpdfvec Rcpp_lpdfvec-class Rcpp_lpdfvec: Vector of lpdf instances

getpara: Get the model parameters

lpdf$optcg: Optimization via Conjugate Gradient

lpdf$optnewton: Optimization via Newton's Method

Log-likelihoods

loglik_gauss Rcpp_loglik_gauss-class Rcpp_loglik_gauss: Gaussian errors, large scale

loglik_gda Rcpp_loglik_gda-class Rcpp_loglik_gda: Gaussian errors with diagonal adjustment

loglik_std Rcpp_loglik_std-class Rcpp_loglik_std: Gaussian errors

Log-priors

logpr_gauss Rcpp_logpr_gauss-class Rcpp_logpr_gauss: Gaussian prior

Covariance Functions

covf Rcpp_covf-class Rcpp_covf: covariance function class

Matern Variations

covf_mat25 Rcpp_covf_mat25-class Rcpp_covf_mat25: Matern covariance function

covf_mat25ang Rcpp_covf_mat25ang-class Rcpp_covf_mat25ang: Matern covariance function with angular transform

covf_mat25pow Rcpp_covf_mat25pow-class Rcpp_covf_mat25pow: Matern covariance function with power transform

Predictions

predictor Rcpp_predictor-class Rcpp_predictor: prediction class

Fitting

obfit(): Outerbase model fit

obpred(): Prediction from outerbase

listcov(): list all covariance functions

Helpers

BFGS_lpdf(): BFGS lpdf

BFGS_std(): BFGS standard

Test Functions

obtest_borehole3d(): Three dim borehole example

obtest_borehole8d(): Eight dim borehole example